Transcript: ENST00000514913.1 FAM105B-004

Description

family with sequence similarity 105, member B [Source:HGNC Symbol;Acc:25118]

Gene Synonyms

FLJ34884

Location

About this transcript

This transcript has 4 exons, is associated with 4646 variant alleles and maps to 168 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000284274.4	FAM105B-001	7800	352aa	ENSP00000284274.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43302	Q96BN8	NM_138348.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506417.1	FAM105B-005	605	84aa	ENSP00000424966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000503023.1	FAM105B-003	911	58aa	ENSP00000427016.1	Nonsense mediated decay		D6RD57	-	-
ENST00000514913.1	FAM105B-004	420	66aa	ENSP00000421928.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000507335.1	FAM105B-002	742	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508678.1	FAM105B-006	469	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 420 bps, Translation length: 66 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000514913.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000366015 (version 1)