Transcript: ENST00000318698.2 ANKFN1-001

Description

ankyrin-repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:26766]

Gene Synonyms

FLJ38335

Location

Chromosome 17: 54,230,836-54,560,007 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 19 domains and features, is associated with 137208 variant alleles and maps to 491 oligo probes.

Gene

This transcript is a product of gene ENSG00000153930.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318698.2	ANKFN1-001	2426	763aa	ENSP00000321627.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32686	Q8N957	NM_153228.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566473.2	ANKFN1-002	3840	1149aa	ENSP00000454224.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BM45	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572945.1	ANKFN1-006	665	173aa	ENSP00000458227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L0N6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000574292.1	ANKFN1-005	904	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000573365.2	ANKFN1-007	767	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000572312.1	ANKFN1-008	433	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000572321.1	ANKFN1-009	428	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000575594.1	ANKFN1-004	723	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 2,426 bps, Translation length: 763 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N957

CCDS

This transcript is a member of the Human CCDS set: CCDS32686

Version

ENST00000318698.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000338043 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000318698.2 ANKFN1-001

Summary