Transcript: ENST00000566473.2 ANKFN1-002

Description

ankyrin-repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:26766]

Gene Synonyms

FLJ38335

Location

Chromosome 17: 54,230,871-54,589,020 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 18 domains and features, is associated with 148560 variant alleles and maps to 484 oligo probes.

Gene

This transcript is a product of gene ENSG00000153930.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000566473.2	ANKFN1-002	3840	1149aa	ENSP00000454224.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BM45	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000318698.2	ANKFN1-001	2426	763aa	ENSP00000321627.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32686	Q8N957	NM_153228.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572945.1	ANKFN1-006	665	173aa	ENSP00000458227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L0N6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000574292.1	ANKFN1-005	904	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000573365.2	ANKFN1-007	767	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000572312.1	ANKFN1-008	433	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000572321.1	ANKFN1-009	428	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000575594.1	ANKFN1-004	723	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 3,840 bps, Translation length: 1,149 residues

Version

ENST00000566473.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000435456 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000566473.2 ANKFN1-002

Summary