Transcript: ENST00000520710.1 GINS4-001

Description

GINS complex subunit 4 (Sld5 homolog) [Source:HGNC Symbol;Acc:28226]

Gene Synonyms

MGC14799, SLD5

Location

Chromosome 8: 41,386,740-41,395,555 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 3614 variant alleles and maps to 203 oligo probes.

Gene

This transcript is a product of gene ENSG00000147536.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000276533.3	GINS4-201	3841	223aa	ENSP00000276533.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6116	E5RFF9 Q9BRT9	NM_032336.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523277.2	GINS4-004	3873	192aa	ENSP00000428901.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFF9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520710.1	GINS4-001	2022	100aa	ENSP00000429581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BRT9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518671.1	GINS4-003	1158	223aa	ENSP00000428754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6116	E5RFF9 Q9BRT9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520354.1	GINS4-002	835	104aa	ENSP00000429894.1	Nonsense mediated decay		E5RH56	-	-
ENST00000518430.1	GINS4-008	515	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520631.1	GINS4-007	494	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522642.1	GINS4-005	390	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520736.1	GINS4-006	375	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,022 bps, Translation length: 100 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BRT9

Version

ENST00000520710.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000377147 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000520710.1 GINS4-001

Summary