Transcript: ENST00000520354.1 GINS4-002

Description

GINS complex subunit 4 (Sld5 homolog) [Source:HGNC Symbol;Acc:28226]

Gene Synonyms

MGC14799, SLD5

Location

Chromosome 8: 41,386,737-41,399,758 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 5532 variant alleles and maps to 239 oligo probes.

Gene

This transcript is a product of gene ENSG00000147536.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000523277.2	GINS4-004	3873	192aa	ENSP00000428901.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFF9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000276533.3	GINS4-201	3841	223aa	ENSP00000276533.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6116	E5RFF9 Q9BRT9	NM_032336.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520710.1	GINS4-001	2022	100aa	ENSP00000429581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BRT9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518671.1	GINS4-003	1158	223aa	ENSP00000428754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6116	E5RFF9 Q9BRT9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520354.1	GINS4-002	835	104aa	ENSP00000429894.1	Nonsense mediated decay		E5RH56	-	-
ENST00000518430.1	GINS4-008	515	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520631.1	GINS4-007	494	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522642.1	GINS4-005	390	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520736.1	GINS4-006	375	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 835 bps, Translation length: 104 residues

Version

ENST00000520354.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000377146 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000520354.1 GINS4-002

Summary