Transcript: ENST00000415210.1 DEGS1-004

Description

delta(4)-desaturase, sphingolipid 1 [Source:HGNC Symbol;Acc:13709]

Gene Synonyms

DEGS, DEGS-1, DES1, Des-1, FADS7, MLD

Location

About this transcript

This transcript has 3 exons, is annotated with 10 domains and features, is associated with 8029 variant alleles and maps to 242 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000323699.4	DEGS1-001	2101	323aa	ENSP00000316476.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1540	O15121	NM_003676.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000391877.3	DEGS1-201	1345	323aa	ENSP00000375749.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1540	O15121	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415210.1	DEGS1-004	957	261aa	ENSP00000400545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EMA0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465848.1	DEGS1-003	633	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498813.1	DEGS1-002	358	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 957 bps, Translation length: 261 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000415210.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000091731 (version 1)