Transcript: ENST00000478210.1 ARHGEF19-003

Description

Rho guanine nucleotide exchange factor (GEF) 19 [Source:HGNC Symbol;Acc:26604]

Gene Synonyms

FLJ33962, WGEF

Location

Chromosome 1: 16,531,395-16,533,021 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 990 variant alleles and maps to 125 oligo probes.

Gene

This transcript is a product of gene ENSG00000142632.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000270747.3	ARHGEF19-001	3029	802aa	ENSP00000270747.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS170	Q8IW93	NM_153213.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449495.1	ARHGEF19-004	921	307aa	ENSP00000391145.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TEV0	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000441785.1	ARHGEF19-007	582	167aa	ENSP00000414370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TEV0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000478117.1	ARHGEF19-005	2035	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478210.1	ARHGEF19-003	685	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471928.1	ARHGEF19-006	653	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 685 bps,

Version

ENST00000478210.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000006291 (version 1)

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Transcript: ENST00000478210.1 ARHGEF19-003

Summary