Transcript: ENST00000396061.1 GTF2A2-008

Description

general transcription factor IIA, 2, 12kDa [Source:HGNC Symbol;Acc:4647]

Gene Synonyms

HsT18745, TF2A2, TFIIA

Location

Chromosome 15: 59,931,308-59,949,678 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 10987 variant alleles and maps to 246 oligo probes.

Gene

This transcript is a product of gene ENSG00000140307.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396060.2	GTF2A2-001	1582	109aa	ENSP00000379372.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10173	P52657	NM_004492.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396063.1	GTF2A2-003	970	109aa	ENSP00000379375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10173	P52657	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396061.1	GTF2A2-008	758	109aa	ENSP00000379373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10173	P52657	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396064.3	GTF2A2-006	633	68aa	ENSP00000379376.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MYR4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484743.1	GTF2A2-007	408	74aa	ENSP00000418574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559706.1	GTF2A2-009	382	72aa	ENSP00000452648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK39	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000267869.4	GTF2A2-005	518	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559141.1	GTF2A2-010	293	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472508.1	GTF2A2-004	202	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480768.1	GTF2A2-002	1278	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 758 bps, Translation length: 109 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P52657

CCDS

This transcript is a member of the Human CCDS set: CCDS10173

Version

ENST00000396061.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000316673 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000396061.1 GTF2A2-008

Summary