Transcript: ENST00000530799.1 C11orf1-004

Description

chromosome 11 open reading frame 1 [Source:HGNC Symbol;Acc:1163]

Gene Synonyms

FLJ23499

Location

Chromosome 11: 111,750,285-111,754,529 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 1953 variant alleles and maps to 284 oligo probes.

Gene

This transcript is a product of gene ENSG00000137720.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260276.3	C11orf1-001	2885	150aa	ENSP00000260276.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8350	E9PLN1 Q9H5F2	NM_022761.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529270.1	C11orf1-002	1437	190aa	ENSP00000431180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLN1 E9PMC1 E9PS33	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530214.1	C11orf1-005	599	121aa	ENSP00000435864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PS93	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528125.1	C11orf1-003	534	104aa	ENSP00000433224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLN1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530799.1	C11orf1-004	509	142aa	ENSP00000432128.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PS33	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 509 bps, Translation length: 142 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000530799.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000391652 (version 1)

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Transcript: ENST00000530799.1 C11orf1-004

Summary