Transcript: ENST00000480609.1 COL4A2-009

Description

collagen, type IV, alpha 2 [Source:HGNC Symbol;Acc:2203]

Gene Synonyms

DKFZp686I14213, FLJ22259, ICH, POREN2

Location

Chromosome 13: 111,158,815-111,160,677 forward strand.

About this transcript

This transcript has 2 exons, is associated with 880 variant alleles and maps to 111 oligo probes.

Gene

This transcript is a product of gene ENSG00000134871.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360467.5	COL4A2-001	6281	1712aa	ENSP00000353654.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41907	A2A352 P08572	NM_001846.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400163.2	COL4A2-004	491	105aa	ENSP00000383027.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A352	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462309.1	COL4A2-006	725	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483683.1	COL4A2-008	686	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463084.1	COL4A2-003	679	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480771.1	COL4A2-005	585	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480609.1	COL4A2-009	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494852.1	COL4A2-002	458	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478681.1	COL4A2-007	337	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 535 bps,

Version

ENST00000480609.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000312862 (version 1)

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Transcript: ENST00000480609.1 COL4A2-009

Summary