Transcript: ENST00000511691.1 UBE2D2-008

Description

ubiquitin-conjugating enzyme E2D 2 [Source:HGNC Symbol;Acc:12475]

Gene Synonyms

E2(17)KB2, PUBC1, UBC4, UBC4/5, UBC5B, UBCH4, UBCH5B, UbcH5B

Location

Chromosome 5: 138,979,989-139,003,247 forward strand.

About this transcript

This transcript has 5 exons, is associated with 9832 variant alleles and maps to 214 oligo probes.

Gene

This transcript is a product of gene ENSG00000131508.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000398733.3	UBE2D2-001	2702	147aa	ENSP00000381717.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43369	D6RAW0 D6RFM0 P62837	NM_003339.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000253815.2	UBE2D2-201	2864	118aa	ENSP00000253815.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47275	D6RAW0 D6RFM0 P62837	NM_181838.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505007.1	UBE2D2-003	1170	98aa	ENSP00000426523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAW0 D6RFM0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505548.1	UBE2D2-002	1113	118aa	ENSP00000424941.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47275	D6RAW0 D6RFM0 P62837	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511725.1	UBE2D2-006	656	118aa	ENSP00000429613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47275	D6RAW0 D6RFM0 P62837	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398734.4	UBE2D2-004	901	147aa	ENSP00000381718.4	Nonsense mediated decay	CCDS43369	D6RAW0 D6RFM0 P62837	-	-
ENST00000511691.1	UBE2D2-008	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510470.1	UBE2D2-007	256	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 543 bps,

Version

ENST00000511691.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000372461 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000511691.1 UBE2D2-008

Summary