Description
RanBP-type and C3HC4-type zinc finger containing 1 [Source:HGNC Symbol;Acc:15864]
Gene Synonyms
C20orf18, HOIL-1, HOIL1, RBCK2, RNF54, UBCE7IP3, XAP3, XAP4, ZRANB4
Location
Chromosome 20: 388,987-391,408 forward strand.
About this transcript
This transcript has 2 exons, is associated with 1159 variant alleles and maps to 207 oligo probes.
Gene
This transcript is a product of gene ENSG00000125826.15 Show transcript tableHide transcript table
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000356286.5 | RBCK1-010 | 2774 | 510aa | ENSP00000348632.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13000 | Q5JWR1 Q9BYM8 | NM_031229.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000353660.3 | RBCK1-009 | 2511 | 468aa | ENSP00000254960.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12998 | Q9BYM8 | NM_006462.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000382181.2 | RBCK1-006 | 2208 | 340aa | ENSP00000371616.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6PVK0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000475269.1 | RBCK1-001 | 1200 | 105aa | ENSP00000417173.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6PVJ6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000441733.1 | RBCK1-013 | 961 | 116aa | ENSP00000387799.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6PVJ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000400247.3 | RBCK1-002 | 790 | 63aa | ENSP00000383106.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6PVJ5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000414880.1 | RBCK1-007 | 765 | 255aa | ENSP00000393841.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
ENST00000411647.1 | RBCK1-004 | 593 | 117aa | ENSP00000415080.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JWR1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000382214.3 | RBCK1-005 | 2752 | 336aa | ENSP00000371649.3 | Nonsense mediated decay | G3XAG9 Q5JWR1 | - | - | |
ENST00000415942.1 | RBCK1-011 | 2613 | 272aa | ENSP00000405288.1 | Nonsense mediated decay | B4DML5 Q5JWR1 | - | - | |
ENST00000400245.3 | RBCK1-003 | 1024 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000465226.1 | RBCK1-012 | 372 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000468272.1 | RBCK1-008 | 1486 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |