Transcript: ENST00000544425.1 SPDEF-201

Description

SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:17257]

Gene Synonyms

PDEF, PSE, RP11-375E1__A.3, bA375E1.3

Location

About this transcript

This transcript has 5 exons, is annotated with 20 domains and features, is associated with 8231 variant alleles and maps to 430 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374037.3	SPDEF-001	1895	335aa	ENSP00000363149.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4794	O95238	NM_012391.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544425.1	SPDEF-201	1677	319aa	ENSP00000442715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59013	O95238	NM_001252294.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,677 bps, Translation length: 319 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95238

CCDS

This transcript is a member of the Human CCDS set: CCDS59013

Version

ENST00000544425.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.