Transcript: ENST00000415839.2 PMS2-002

Description

PMS2 postmeiotic segregation increased 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:9122]

Gene Synonyms

HNPCC4, H_DJ0042M02.9, PMS2CL, PMSL2

Location

Chromosome 7: 6,042,941-6,045,697 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 2464 variant alleles and maps to 722 oligo probes.

Gene

This transcript is a product of gene ENSG00000122512.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265849.7	PMS2-001	2855	862aa	ENSP00000265849.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5343	P54278	NM_000535.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441476.2	PMS2-201	2271	756aa	ENSP00000392843.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J167	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406569.3	PMS2-005	1719	572aa	ENSP00000384308.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P54278	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382321.4	PMS2-006	1386	461aa	ENSP00000371758.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P54278	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469652.1	PMS2-004	93	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000380416.5	PMS2-007	1103	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000415839.2	PMS2-002	924	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 924 bps,

Version

ENST00000415839.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000325467 (version 1)

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Transcript: ENST00000415839.2 PMS2-002

Summary