Transcript: ENST00000466776.1 GTF3A-006

Description

general transcription factor IIIA [Source:HGNC Symbol;Acc:4662]

Gene Synonyms

AP2, TFIIIA

Location

Chromosome 13: 27,998,903-28,008,287 forward strand.

About this transcript

This transcript has 6 exons, is associated with 4063 variant alleles and maps to 307 oligo probes.

Gene

This transcript is a product of gene ENSG00000122034.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381140.4	GTF3A-001	1383	365aa	ENSP00000370532.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45019	Q92664	NM_002097.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439403.1	GTF3A-010	628	178aa	ENSP00000393050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBK4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000419181.1	GTF3A-002	1191	188aa	ENSP00000389655.1	Nonsense mediated decay		H7BZH7	-	-
ENST00000438571.1	GTF3A-005	792	104aa	ENSP00000387806.1	Nonsense mediated decay		H7BZ51	-	-
ENST00000435781.1	GTF3A-004	688	134aa	ENSP00000409175.1	Nonsense mediated decay		H7C326	-	-
ENST00000470606.1	GTF3A-003	1919	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493903.1	GTF3A-008	748	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466776.1	GTF3A-006	461	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482655.1	GTF3A-009	827	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 461 bps,

Version

ENST00000466776.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000044286 (version 1)

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Transcript: ENST00000466776.1 GTF3A-006

Summary