Transcript: ENST00000573002.1 PAPD5-004

Description

PAP associated domain containing 5 [Source:HGNC Symbol;Acc:30758]

Gene Synonyms

TRF4-2

Location

Chromosome 16: 50,248,137-50,265,742 forward strand.

About this transcript

This transcript has 10 exons, is associated with 7180 variant alleles and maps to 383 oligo probes.

Gene

This transcript is a product of gene ENSG00000121274.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000436909.3	PAPD5-001	4635	698aa	ENSP00000396995.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54006	B4DRJ7 B7ZLC1 G4U4J3 Q5EBM7 Q8NDF8	NM_001040285.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357464.3	PAPD5-201	7842	619aa	ENSP00000350054.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DRJ7 B7ZLC1 E9PC61 Q5EBM7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561678.1	PAPD5-002	2916	588aa	ENSP00000455837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DRJ7 H3BQM0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000573002.1	PAPD5-004	3754	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000562717.1	PAPD5-003	1866	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 3,754 bps,

Version

ENST00000573002.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000423152 (version 2)

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Transcript: ENST00000573002.1 PAPD5-004

Summary