Transcript: ENST00000419026.1 SENP5-003

Description

SUMO1/sentrin specific peptidase 5 [Source:HGNC Symbol;Acc:28407]

Gene Synonyms

MGC27076

Location

Chromosome 3: 196,594,816-196,657,883 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 6 domains and features, is associated with 29204 variant alleles and maps to 315 oligo probes.

Gene

This transcript is a product of gene ENSG00000119231.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000323460.5	SENP5-001	6308	755aa	ENSP00000327197.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3322	C9JHT8 Q96HI0	NM_152699.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445299.2	SENP5-002	2491	709aa	ENSP00000390231.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DY82	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419026.1	SENP5-003	973	245aa	ENSP00000396927.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHT8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434433.1	SENP5-006	622	77aa	ENSP00000415227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000448068.1	SENP5-005	484	98aa	ENSP00000405663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000489744.1	SENP5-004	430	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463245.1	SENP5-007	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 973 bps, Translation length: 245 residues

Version

ENST00000419026.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000340526 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000419026.1 SENP5-003

Summary