Transcript: ENST00000433461.2 TMEM5-004

Description

transmembrane protein 5 [Source:HGNC Symbol;Acc:13530]

Gene Synonyms

HP10481, MDDGA10

Location

Chromosome 12: 64,197,485-64,202,756 forward strand.

About this transcript

This transcript has 2 exons, is associated with 2120 variant alleles and maps to 259 oligo probes.

Gene

This transcript is a product of gene ENSG00000118600.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261234.6	TMEM5-001	1918	443aa	ENSP00000261234.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8966	G3V1K2 Q9Y2B1	NM_014254.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537373.1	TMEM5-003	1966	183aa	ENSP00000440280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61179	G3V1K2	NM_001278237.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543342.1	TMEM5-002	1599	120aa	ENSP00000440845.1	Nonsense mediated decay		F5GXF8	-	-
ENST00000537982.1	TMEM5-007	882	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000535963.1	TMEM5-008	338	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000433461.2	TMEM5-004	2002	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000536219.1	TMEM5-006	864	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,002 bps,

Version

ENST00000433461.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000400827 (version 1)

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Transcript: ENST00000433461.2 TMEM5-004

Summary