Transcript: ENST00000527853.1 RPS25-008

Description

ribosomal protein S25 [Source:HGNC Symbol;Acc:10413]

Gene Synonyms

S25

Location

About this transcript

This transcript has 3 exons, is associated with 1976 variant alleles and maps to 428 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000527673.1	RPS25-001	835	125aa	ENSP00000435096.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8406	P62851	NM_001028.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527791.1	RPS25-003	711	39aa	ENSP00000436193.1	Nonsense mediated decay		E9PQK3	-	-
ENST00000532567.1	RPS25-005	508	39aa	ENSP00000431634.1	Nonsense mediated decay		E9PK60	-	-
ENST00000528547.1	RPS25-007	189	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527853.1	RPS25-008	1462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524864.1	RPS25-002	1078	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,462 bps,

Version

ENST00000527853.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000389328 (version 1)