Transcript: ENST00000489389.1 STAM2-003

Description

signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:HGNC Symbol;Acc:11358]

Gene Synonyms

HBP, Hbp, STAM2A, STAM2B

Location

Chromosome 2: 152,976,946-152,981,200 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1969 variant alleles and maps to 173 oligo probes.

Gene

This transcript is a product of gene ENSG00000115145.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263904.4	STAM2-001	5701	525aa	ENSP00000263904.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2196	O75886	NM_005843.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465460.1	STAM2-006	600	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482997.1	STAM2-004	1488	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463854.1	STAM2-002	1364	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489389.1	STAM2-003	1292	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494589.1	STAM2-005	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,292 bps,

Version

ENST00000489389.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338424 (version 1)

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Transcript: ENST00000489389.1 STAM2-003

Summary