Transcript: ENST00000486055.1 KCNIP3-005

Description

Kv channel interacting protein 3, calsenilin [Source:HGNC Symbol;Acc:15523]

Gene Synonyms

CSEN, DREAM, KCHIP3, calsenilin

Location

Chromosome 2: 95,963,075-95,964,868 forward strand.

About this transcript

This transcript has 2 exons, is associated with 813 variant alleles and maps to 82 oligo probes.

Gene

This transcript is a product of gene ENSG00000115041.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295225.5	KCNIP3-001	2934	256aa	ENSP00000295225.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2013	Q9Y2W7	NM_013434.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360990.3	KCNIP3-201	2732	234aa	ENSP00000354261.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468529.1	KCNIP3-004	985	230aa	ENSP00000417499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33245	Q9Y2W7	NM_001034914.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377181.2	KCNIP3-003	2971	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461336.1	KCNIP3-006	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486055.1	KCNIP3-005	565	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475491.1	KCNIP3-002	3658	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 565 bps,

Version

ENST00000486055.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338591 (version 1)

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Transcript: ENST00000486055.1 KCNIP3-005

Summary