Transcript: ENST00000233330.6 RTKN-004

Description

rhotekin [Source:HGNC Symbol;Acc:10466]

Gene Synonyms

B5, RTKN1

Location

Chromosome 2: 74,653,010-74,667,758 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 11 domains and features, is associated with 6432 variant alleles and maps to 472 oligo probes.

Gene

This transcript is a product of gene ENSG00000114993.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000272430.5	RTKN-002	2142	563aa	ENSP00000272430.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33226	Q9BST9	NM_001015055.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000305557.5	RTKN-001	2646	550aa	ENSP00000305298.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1941	Q9BST9	NM_033046.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000233330.6	RTKN-004	2220	513aa	ENSP00000233330.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42699	Q9BST9	NM_001015056.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484453.1	RTKN-007	820	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479256.1	RTKN-006	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464094.2	RTKN-005	1266	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472518.1	RTKN-003	1105	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492013.1	RTKN-009	853	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460968.1	RTKN-011	842	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469859.1	RTKN-008	496	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,220 bps, Translation length: 513 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BST9

CCDS

This transcript is a member of the Human CCDS set: CCDS42699

Version

ENST00000233330.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000328236 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000233330.6 RTKN-004

Summary