Transcript: ENST00000232607.2 UMPS-001

Description

uridine monophosphate synthetase [Source:HGNC Symbol;Acc:12563]

Gene Synonyms

OPRT, RP11-71H17.9

Location

Chromosome 3: 124,449,213-124,464,040 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 13 domains and features, is associated with 6733 variant alleles and maps to 517 oligo probes.

Gene

This transcript is a product of gene ENSG00000114491.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000232607.2	UMPS-001	2658	480aa	ENSP00000232607.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3029	A8K5J1 B5LY64 P11172	NM_000373.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536109.1	UMPS-202	2235	388aa	ENSP00000443577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5LY64 P11172	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538242.1	UMPS-203	1982	302aa	ENSP00000444988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5LY64 P11172	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413078.2	UMPS-201	1691	205aa	ENSP00000397965.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P11172	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479719.1	UMPS-009	2340	342aa	ENSP00000420754.1	Nonsense mediated decay		E9PFD2	-	-
ENST00000467167.1	UMPS-008	2242	66aa	ENSP00000419618.1	Nonsense mediated decay		F2Z303	-	-
ENST00000460034.1	UMPS-006	2081	66aa	ENSP00000420409.1	Nonsense mediated decay		F2Z303	-	-
ENST00000462091.1	UMPS-002	2001	57aa	ENSP00000417893.1	Nonsense mediated decay		F2Z3P2	-	-
ENST00000474588.1	UMPS-004	1789	142aa	ENSP00000420348.1	Nonsense mediated decay		F8WDG4	-	-
ENST00000497791.1	UMPS-005	1691	57aa	ENSP00000419121.1	Nonsense mediated decay		F2Z3P2	-	-
ENST00000498715.1	UMPS-011	832	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495751.1	UMPS-012	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487622.1	UMPS-013	799	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,658 bps, Translation length: 480 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P11172

CCDS

This transcript is a member of the Human CCDS set: CCDS3029

Version

ENST00000232607.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000355271 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000232607.2 UMPS-001

Summary