Transcript: ENST00000505349.1 AGXT2-006

Description

alanine--glyoxylate aminotransferase 2 [Source:HGNC Symbol;Acc:14412]

Gene Synonyms

AGT2, DAIBAT

Location

About this transcript

This transcript has 3 exons, is associated with 6907 variant alleles and maps to 92 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000231420.6	AGXT2-001	2364	514aa	ENSP00000231420.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3908	Q9BYV1	NM_031900.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510428.1	AGXT2-004	1561	439aa	ENSP00000422799.1	Nonsense mediated decay		E9PDL7	-	-
ENST00000512135.1	AGXT2-005	1831	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505542.1	AGXT2-002	1033	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505349.1	AGXT2-006	853	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 853 bps,

Version

ENST00000505349.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000366817 (version 1)