Transcript: ENST00000231420.6 AGXT2-001

Description

alanine--glyoxylate aminotransferase 2 [Source:HGNC Symbol;Acc:14412]

Gene Synonyms

AGT2, DAIBAT

Location

About this transcript

This transcript has 14 exons, is annotated with 9 domains and features, is associated with 23977 variant alleles and maps to 576 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000231420.6	AGXT2-001	2364	514aa	ENSP00000231420.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3908	Q9BYV1	NM_031900.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510428.1	AGXT2-004	1561	439aa	ENSP00000422799.1	Nonsense mediated decay		E9PDL7	-	-
ENST00000512135.1	AGXT2-005	1831	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505542.1	AGXT2-002	1033	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505349.1	AGXT2-006	853	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,364 bps, Translation length: 514 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BYV1

CCDS

This transcript is a member of the Human CCDS set: CCDS3908

Version

ENST00000231420.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000207574 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.