Transcript: ENST00000368982.4 SNX3-201

Description

sorting nexin 3 [Source:HGNC Symbol;Acc:11174]

Gene Synonyms

Grd19, MCOPS8, SDP3

Location

Chromosome 6: 108,543,441-108,582,464 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 17637 variant alleles and maps to 195 oligo probes.

Gene

This transcript is a product of gene ENSG00000112335.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000230085.8	SNX3-001	1755	162aa	ENSP00000230085.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5064	O60493	NM_003795.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426155.2	SNX3-004	1072	130aa	ENSP00000401779.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5065	O60493	NM_152827.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000349379.5	SNX3-003	890	140aa	ENSP00000296991.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O60493	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368982.4	SNX3-201	681	113aa	ENSP00000357978.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O60493	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368979.2	SNX3-002	1537	113aa	ENSP00000357975.2	Nonsense mediated decay		O60493	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 681 bps, Translation length: 113 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60493

Version

ENST00000368982.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000368982.4 SNX3-201

Summary