Description
RAB5B, member RAS oncogene family [Source:HGNC Symbol;Acc:9784]
Location
Chromosome 12: 56,367,868-56,384,495 forward strand.
About this transcript
This transcript has 5 exons, is annotated with 12 domains and features, is associated with 7129 variant alleles and maps to 201 oligo probes.
Gene
This transcript is a product of gene ENSG00000111540.11 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000360299.5 | RAB5B-001 | 3362 | 215aa | ENSP00000353444.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8900 | F8VUA5 F8VVZ0 P61020 | NM_002868.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000553116.1 | RAB5B-004 | 3322 | 215aa | ENSP00000450168.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8900 | F8VUA5 F8VVZ0 P61020 | NM_001252036.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000448789.2 | RAB5B-003 | 1530 | 174aa | ENSP00000391319.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58244 | F8VVZ0 P61020 | NM_001252037.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000548068.1 | RAB5B-005 | 596 | 115aa | ENSP00000447895.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VUA5 F8VVZ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551459.1 | RAB5B-007 | 569 | 100aa | ENSP00000449554.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VVZ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000549915.1 | RAB5B-006 | 494 | 79aa | ENSP00000449762.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VWZ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000549505.1 | RAB5B-002 | 3148 | 73aa | ENSP00000450285.1 | Nonsense mediated decay | F8VPW9 | - | - | |
| ENST00000550283.1 | RAB5B-010 | 665 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000546810.1 | RAB5B-008 | 589 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000549034.1 | RAB5B-009 | 558 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |