Description
collagen, type I, alpha 1 [Source:HGNC Symbol;Acc:2197]
Gene Synonyms
OI4
Location
Chromosome 17: 48,260,650-48,278,993 reverse strand.
About this transcript
This transcript has 51 exons, is annotated with 50 domains and features, is associated with 12369 variant alleles and maps to 1512 oligo probes.
Gene
This transcript is a product of gene ENSG00000108821.9 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000225964.5 | COL1A1-001 | 6727 | 1464aa | ENSP00000225964.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11561 | P02452 Q6LAN8 Q9UMA6 | NM_000088.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000507689.1 | COL1A1-013 | 549 | 154aa | ENSP00000460459.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L3H7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000471344.1 | COL1A1-006 | 1192 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000510710.3 | COL1A1-018 | 1147 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000486572.1 | COL1A1-009 | 836 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000511732.1 | COL1A1-016 | 789 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000474644.1 | COL1A1-002 | 640 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000463440.1 | COL1A1-005 | 614 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476387.1 | COL1A1-007 | 600 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000495677.1 | COL1A1-003 | 594 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000504289.1 | COL1A1-014 | 481 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000485870.1 | COL1A1-004 | 403 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494334.1 | COL1A1-008 | 396 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |