Transcript: ENST00000225577.4 RPS6KB1-001

Description

ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Source:HGNC Symbol;Acc:10436]

Gene Synonyms

PS6K, S6K, S6K-beta-1, S6K1, STK14A, p70 S6KA, p70(S6K)-alpha, p70-S6K, p70-alpha

Location

Chromosome 17: 57,970,525-58,027,925 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 14 domains and features, is associated with 25001 variant alleles and maps to 1073 oligo probes.

Gene

This transcript is a product of gene ENSG00000108443.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000225577.4	RPS6KB1-001	5375	525aa	ENSP00000225577.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11621	B4DLT4 K7EIM2 P23443	NM_003161.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393021.3	RPS6KB1-201	2046	472aa	ENSP00000376744.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62273	B4DLT4 K7EIM2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406116.3	RPS6KB1-002	1982	451aa	ENSP00000384335.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62271	K7EIM2 Q7Z721	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443572.2	RPS6KB1-008	1913	502aa	ENSP00000441993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62272	F6UYM1	NM_001272042.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592726.1	RPS6KB1-007	622	62aa	ENSP00000464805.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EIM2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000472940.1	RPS6KB1-003	2808	140aa	ENSP00000468058.1	Nonsense mediated decay		K7EIM2 K7ER06	-	-
ENST00000489824.1	RPS6KB1-004	909	52aa	ENSP00000466562.1	Nonsense mediated decay		K7EMM2	-	-
ENST00000587061.1	RPS6KB1-011	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477179.1	RPS6KB1-005	431	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000590928.1	RPS6KB1-010	720	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475155.1	RPS6KB1-006	719	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587622.1	RPS6KB1-009	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 5,375 bps, Translation length: 525 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23443

CCDS

This transcript is a member of the Human CCDS set: CCDS11621

Version

ENST00000225577.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000319324 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000225577.4 RPS6KB1-001

Summary