Transcript: ENST00000583218.1 CSF3-008

Description

colony stimulating factor 3 (granulocyte) [Source:HGNC Symbol;Acc:2438]

Gene Synonyms

C17orf33, CSF3OS, G-CSF, GCSF, MGC45931

Location

Chromosome 17: 38,171,614-38,173,170 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 923 variant alleles and maps to 377 oligo probes.

Gene

This transcript is a product of gene ENSG00000108342.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000225474.2	CSF3-001	1509	207aa	ENSP00000225474.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11357	P09919	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000331769.2	CSF3-002	1673	200aa	ENSP00000327766.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N4W3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394149.3	CSF3-003	1583	204aa	ENSP00000377705.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42314	P09919 Q6FH65	NM_172219.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577675.1	CSF3-006	1360	164aa	ENSP00000462991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D7RVA3 J3KTH8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394148.3	CSF3-004	622	171aa	ENSP00000377704.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11358	P09919	NM_172220.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583218.1	CSF3-008	579	155aa	ENSP00000464421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRX2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000579852.1	CSF3-007	1288	57aa	ENSP00000464157.1	Nonsense mediated decay		J3QRD4	-	-
ENST00000479880.1	CSF3-005	947	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000582798.1	CSF3-009	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 579 bps, Translation length: 155 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000583218.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000446854 (version 1)

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Transcript: ENST00000583218.1 CSF3-008

Summary