Transcript: ENST00000481483.1 CASP2-006

Description

caspase 2, apoptosis-related cysteine peptidase [Source:HGNC Symbol;Acc:1503]

Gene Synonyms

CASP-2, ICH1, NEDD-2, NEDD2, PPP1R57

Location

Chromosome 7: 142,988,711-142,991,574 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1533 variant alleles and maps to 170 oligo probes.

Gene

This transcript is a product of gene ENSG00000106144.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310447.5	CASP2-001	4225	452aa	ENSP00000312664.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5879	B4E0I5 P42575	NM_032983.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392925.2	CASP2-005	616	171aa	ENSP00000376656.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRR9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350623.3	CASP2-003	1146	108aa	ENSP00000340030.3	Nonsense mediated decay	CCDS47733	-	-	-
ENST00000493642.1	CASP2-002	2166	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472067.1	CASP2-004	5769	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481483.1	CASP2-006	575	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 575 bps,

Version

ENST00000481483.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000327429 (version 1)

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Transcript: ENST00000481483.1 CASP2-006

Summary