Transcript: ENST00000592242.1 PPP6R1-007

Description

protein phosphatase 6, regulatory subunit 1 [Source:HGNC Symbol;Acc:29195]

Gene Synonyms

KIAA1115, PP6R1, SAP190, SAPS1

Location

Chromosome 19: 55,756,712-55,767,137 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 5219 variant alleles and maps to 77 oligo probes.

Gene

This transcript is a product of gene ENSG00000105063.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000412770.2	PPP6R1-001	3961	881aa	ENSP00000414202.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46186	K7EM28 Q96ID3 Q9UPN7	NM_014931.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587283.1	PPP6R1-002	2953	881aa	ENSP00000467521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46186	K7EM28 Q96ID3 Q9UPN7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592242.1	PPP6R1-007	574	157aa	ENSP00000466332.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EM28	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587457.1	PPP6R1-008	2389	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589343.1	PPP6R1-005	904	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591323.1	PPP6R1-004	848	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586690.1	PPP6R1-006	668	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591602.1	PPP6R1-003	520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 574 bps, Translation length: 157 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000592242.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000452669 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000592242.1 PPP6R1-007

Summary