Transcript: ENST00000599752.1 ARHGEF18-006

Description

Rho/Rac guanine nucleotide exchange factor (GEF) 18 [Source:HGNC Symbol;Acc:17090]

Gene Synonyms

KIAA0521, MGC15913, P114-RhoGEF

Location

Chromosome 19: 7,460,038-7,506,876 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 22010 variant alleles and maps to 94 oligo probes.

Gene

This transcript is a product of gene ENSG00000104880.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359920.6	ARHGEF18-001	5733	1173aa	ENSP00000352995.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45946	M0R125 Q6ZSZ5	NM_001130955.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000319670.9	ARHGEF18-002	5212	1015aa	ENSP00000319200.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12177	M0R125 Q6ZSZ5	NM_015318.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000594665.1	ARHGEF18-003	4616	812aa	ENSP00000470729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000599752.1	ARHGEF18-006	582	86aa	ENSP00000471597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R125	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000595600.1	ARHGEF18-005	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 582 bps, Translation length: 86 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000599752.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000458961 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000599752.1 ARHGEF18-006

Summary