Transcript: ENST00000565022.1 PYCARD-004

Description

PYD and CARD domain containing [Source:HGNC Symbol;Acc:16608]

Gene Synonyms

ASC, CARD5, TMS, TMS-1, TMS1

Location

About this transcript

This transcript has 2 exons, is associated with 695 variant alleles and maps to 236 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000247470.9	PYCARD-001	990	195aa	ENSP00000247470.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10708	Q9ULZ3	NM_013258.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561508.1	PYCARD-003	1137	125aa	ENSP00000455141.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP42	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000350605.4	PYCARD-002	696	176aa	ENSP00000340441.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10709	Q9ULZ3	NM_145182.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565022.1	PYCARD-004	650	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 650 bps,

Version

ENST00000565022.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000433564 (version 1)