Transcript: ENST00000247470.9 PYCARD-001

Description

PYD and CARD domain containing [Source:HGNC Symbol;Acc:16608]

Gene Synonyms

ASC, CARD5, TMS, TMS-1, TMS1

Location

About this transcript

This transcript has 3 exons, is annotated with 11 domains and features, is associated with 1081 variant alleles and maps to 290 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000247470.9	PYCARD-001	990	195aa	ENSP00000247470.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10708	Q9ULZ3	NM_013258.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561508.1	PYCARD-003	1137	125aa	ENSP00000455141.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP42	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000350605.4	PYCARD-002	696	176aa	ENSP00000340441.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10709	Q9ULZ3	NM_145182.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565022.1	PYCARD-004	650	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 990 bps, Translation length: 195 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9ULZ3

CCDS

This transcript is a member of the Human CCDS set: CCDS10708

Version

ENST00000247470.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000255539 (version 13)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.