Transcript: ENST00000477696.1 CD40-005

Description

CD40 molecule, TNF receptor superfamily member 5 [Source:HGNC Symbol;Acc:11919]

Gene Synonyms

Bp50, CDW40, TNFRSF5, p50

Location

Chromosome 20: 44,747,012-44,757,643 forward strand.

About this transcript

This transcript has 8 exons, is associated with 4630 variant alleles and maps to 549 oligo probes.

Gene

This transcript is a product of gene ENSG00000101017.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372285.3	CD40-001	1729	277aa	ENSP00000361359.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13393	P25942 Q09LL4	NM_001250.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372276.3	CD40-002	1623	203aa	ENSP00000361350.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13394	P25942 Q09LL4	NM_152854.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466205.1	CD40-006	822	159aa	ENSP00000434825.1	Nonsense mediated decay		Q09LL4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000489304.1	CD40-003	1733	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477696.1	CD40-005	771	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461171.1	CD40-004	710	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 771 bps,

Version

ENST00000477696.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000080380 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

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Transcript: ENST00000477696.1 CD40-005

Summary