Transcript: ENST00000554804.1 YY1-004

Description

YY1 transcription factor [Source:HGNC Symbol;Acc:12856]

Gene Synonyms

DELTA, INO80S, NF-E1, UCRBP, YIN-YANG-1

Location

Chromosome 14: 100,706,096-100,744,479 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 19184 variant alleles and maps to 423 oligo probes.

Gene

This transcript is a product of gene ENSG00000100811.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262238.4	YY1-001	6697	414aa	ENSP00000262238.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9957	G3V3M8 P25490	NM_003403.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554804.1	YY1-004	1114	190aa	ENSP00000452225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554371.1	YY1-006	636	34aa	ENSP00000451329.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3M8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000553625.1	YY1-003	422	123aa	ENSP00000452140.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554579.1	YY1-005	826	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,114 bps, Translation length: 190 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000554804.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000414048 (version 1)

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Transcript: ENST00000554804.1 YY1-004

Summary