Transcript: ENST00000554206.1 RPS6KA5-002

Description

ribosomal protein S6 kinase, 90kDa, polypeptide 5 [Source:HGNC Symbol;Acc:10434]

Gene Synonyms

MSK1, MSPK1, RLPK

Location

Chromosome 14: 91,367,019-91,526,980 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 11 domains and features, is associated with 67182 variant alleles and maps to 274 oligo probes.

Gene

This transcript is a product of gene ENSG00000100784.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261991.3	RPS6KA5-001	4202	802aa	ENSP00000261991.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9893	B7Z2Y5 O75582 Q9UG98	NM_004755.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536315.2	RPS6KA5-004	2993	723aa	ENSP00000442803.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z2Y5 Q9UG98	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418736.2	RPS6KA5-003	2249	549aa	ENSP00000402787.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45149	O75582	NM_182398.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556178.1	RPS6KA5-005	2118	79aa	ENSP00000451305.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554206.1	RPS6KA5-002	1420	219aa	ENSP00000450591.1	Nonsense mediated decay		G3V2D1	-	-
ENST00000556594.1	RPS6KA5-006	596	83aa	ENSP00000451736.1	Nonsense mediated decay		G3V4D7	-	-
ENST00000556304.1	RPS6KA5-007	278	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 6, Transcript length: 1,420 bps, Translation length: 219 residues

Version

ENST00000554206.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000411445 (version 1)

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Transcript: ENST00000554206.1 RPS6KA5-002

Summary