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Human (GRCh37.p13)
Description

collagen, type IX, alpha 3 [Source:HGNC Symbol;Acc:2219]

Gene Synonyms

DJ885L7.4.1, EDM3, FLJ90759, IDD, MED

Location
About this transcript

This transcript has 32 exons, is annotated with 24 domains and features, is associated with 15380 variant alleles and maps to 804 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000343916.3COL9A3-0012485684aaENSP00000341640.3
 
Protein coding
CCDS13505Q14050 Q96IF4 NM_001853.3Ensembl CanonicalGENCODE basic
ENST00000452372.1COL9A3-005596191aaENSP00000394280.1
 
Protein coding
Q4VXW1 -CDS 3' incomplete
ENST00000462700.1COL9A3-0071237No protein-
 
Processed transcript
---
ENST00000467819.1COL9A3-003993No protein-
 
Processed transcript
---
ENST00000489045.1COL9A3-004838No protein-
 
Processed transcript
---
ENST00000463487.1COL9A3-015760No protein-
 
Processed transcript
---
ENST00000477612.1COL9A3-009635No protein-
 
Processed transcript
---
ENST00000466532.1COL9A3-014539No protein-
 
Processed transcript
---
ENST00000466192.1COL9A3-0102194No protein-
 
Retained intron
---
ENST00000472880.1COL9A3-013959No protein-
 
Retained intron
---
ENST00000469852.1COL9A3-002901No protein-
 
Retained intron
---
ENST00000469802.1COL9A3-006680No protein-
 
Retained intron
---
ENST00000481800.1COL9A3-012548No protein-
 
Retained intron
---
ENST00000490398.1COL9A3-011496No protein-
 
Retained intron
---
Statistics

Exons: 32, Coding exons: 32, Transcript length: 2,485 bps, Translation length: 684 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14050

CCDS

This transcript is a member of the Human CCDS set: CCDS13505

Version

ENST00000343916.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000080071 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.