Transcript: ENST00000263239.2 DDX18-001

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:HGNC Symbol;Acc:2741]

Gene Synonyms

MrDb

Location

Chromosome 2: 118,572,226-118,589,955 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 19 domains and features, is associated with 8392 variant alleles and maps to 789 oligo probes.

Gene

This transcript is a product of gene ENSG00000088205.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263239.2	DDX18-001	3796	670aa	ENSP00000263239.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2120	Q4ZG72 Q53TI6 Q9NVP1	NM_006773.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415038.1	DDX18-003	644	214aa	ENSP00000415604.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C452	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000474694.1	DDX18-006	1083	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476149.1	DDX18-005	5674	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489933.1	DDX18-002	720	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461443.1	DDX18-004	642	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 3,796 bps, Translation length: 670 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NVP1

CCDS

This transcript is a member of the Human CCDS set: CCDS2120

Version

ENST00000263239.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000129632 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000263239.2 DDX18-001

Summary