Transcript: ENST00000586852.1 PTPRH-007

Description

protein tyrosine phosphatase, receptor type, H [Source:HGNC Symbol;Acc:9672]

Gene Synonyms

SAP-1, SAP1

Location

Chromosome 19: 55,715,360-55,718,622 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 1859 variant alleles and maps to 82 oligo probes.

Gene

This transcript is a product of gene ENSG00000080031.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376350.3	PTPRH-001	3877	1115aa	ENSP00000365528.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33110	Q9HD43	NM_002842.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000263434.5	PTPRH-002	3343	937aa	ENSP00000263434.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54321	C9JCH2	NM_001161440.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000588559.1	PTPRH-003	2636	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586852.1	PTPRH-007	680	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586310.1	PTPRH-008	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000588370.1	PTPRH-005	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587662.1	PTPRH-004	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 680 bps,

Version

ENST00000586852.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000452652 (version 1)

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Transcript: ENST00000586852.1 PTPRH-007

Summary