Transcript: ENST00000553251.1 ANKRD13A-007

Description

ankyrin repeat domain 13A [Source:HGNC Symbol;Acc:21268]

Gene Synonyms

ANKRD13, NY-REN-25

Location

Chromosome 12: 110,465,704-110,477,233 forward strand.

About this transcript

This transcript has 6 exons, is associated with 4449 variant alleles and maps to 323 oligo probes.

Gene

This transcript is a product of gene ENSG00000076513.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261739.4	ANKRD13A-001	4148	590aa	ENSP00000261739.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9140	B3KMT9 B4DDL0 Q3ZTS7 Q8IZ07	NM_033121.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547639.1	ANKRD13A-006	904	301aa	ENSP00000449781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000547419.2	ANKRD13A-008	640	173aa	ENSP00000474745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000551491.1	ANKRD13A-010	561	83aa	ENSP00000447110.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W150	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000553025.1	ANKRD13A-004	1455	173aa	ENSP00000474172.1	Nonsense mediated decay		S4R3D2	-	-
ENST00000550404.1	ANKRD13A-002	2350	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553251.1	ANKRD13A-007	3315	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000549826.1	ANKRD13A-009	1033	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546476.1	ANKRD13A-011	896	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553246.1	ANKRD13A-005	762	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 3,315 bps,

Version

ENST00000553251.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000403434 (version 2)

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Transcript: ENST00000553251.1 ANKRD13A-007

Summary