Transcript: ENST00000558287.1 CA12-004

Description

carbonic anhydrase XII [Source:HGNC Symbol;Acc:1371]

Gene Synonyms

CAXII, HsT18816

Location

Chromosome 15: 63,632,221-63,634,273 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 939 variant alleles and maps to 63 oligo probes.

Gene

This transcript is a product of gene ENSG00000074410.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000178638.3	CA12-001	6413	354aa	ENSP00000178638.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10185	O43570	NM_001218.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344366.3	CA12-002	2744	343aa	ENSP00000343088.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10186	O43570	NM_206925.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422263.2	CA12-003	2556	283aa	ENSP00000403028.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KUB4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560666.1	CA12-005	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558287.1	CA12-004	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560293.1	CA12-006	538	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 561 bps,

Version

ENST00000558287.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000417756 (version 1)

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Transcript: ENST00000558287.1 CA12-004

Summary