Transcript: ENST00000569002.1 SLC12A3-006

Description

solute carrier family 12 (sodium/chloride transporter), member 3 [Source:HGNC Symbol;Acc:10912]

Gene Synonyms

NCC, NCCT, TSC

Location

Chromosome 16: 56,936,134-56,938,764 forward strand.

About this transcript

This transcript has 2 exons, is associated with 1281 variant alleles and maps to 57 oligo probes.

Gene

This transcript is a product of gene ENSG00000070915.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000438926.2	SLC12A3-001	5567	1030aa	ENSP00000402152.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10770	P55017	NM_001126108.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563236.1	SLC12A3-005	4208	1021aa	ENSP00000456149.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58464	P55017	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000262502.5	SLC12A3-003	4208	1020aa	ENSP00000262502.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QSS1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566786.1	SLC12A3-002	3119	1029aa	ENSP00000457552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45491	P55017	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563352.1	SLC12A3-007	787	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569002.1	SLC12A3-006	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 745 bps,

Version

ENST00000569002.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000432339 (version 1)

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Transcript: ENST00000569002.1 SLC12A3-006

Summary