Transcript: ENST00000543099.1 BCAT1-009

Description

branched chain amino-acid transaminase 1, cytosolic [Source:HGNC Symbol;Acc:976]

Gene Synonyms

BCATC, BCT1, ECA39, MECA39, PNAS121, PP18

Location

Chromosome 12: 24,970,590-24,983,262 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 5565 variant alleles and maps to 196 oligo probes.

Gene

This transcript is a product of gene ENSG00000060982.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000539282.1	BCAT1-004	1811	398aa	ENSP00000443459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53761	P54687	NM_001178093.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261192.7	BCAT1-001	8335	386aa	ENSP00000261192.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44845	P54687	NM_005504.6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538118.1	BCAT1-006	4694	385aa	ENSP00000440817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53760	P54687	NM_001178094.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342945.5	BCAT1-002	4319	325aa	ENSP00000339805.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53762	P54687	NM_001178092.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539780.1	BCAT1-003	1360	349aa	ENSP00000440827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53763	P54687	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546285.1	BCAT1-008	549	144aa	ENSP00000438593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H2F2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000544418.1	BCAT1-005	2320	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000543099.1	BCAT1-009	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000355164.3	BCAT1-007	521	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 568 bps,

Version

ENST00000543099.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000402084 (version 1)

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Transcript: ENST00000543099.1 BCAT1-009

Summary