Transcript: ENST00000474475.1 TNFRSF9-003

Description

tumor necrosis factor receptor superfamily, member 9 [Source:HGNC Symbol;Acc:11924]

Gene Synonyms

4-1BB, CD137, CDw137, ILA

Location

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 5862 variant alleles and maps to 84 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377507.3	TNFRSF9-001	1923	255aa	ENSP00000366729.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS92	Q07011	NM_001561.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474475.1	TNFRSF9-003	445	87aa	ENSP00000465272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJQ2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000492571.1	TNFRSF9-002	584	75aa	ENSP00000464978.1	Nonsense mediated decay		K7EJ11	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 445 bps, Translation length: 87 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000474475.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000083600 (version 2)