Transcript: ENST00000480647.1 THAP3-007

Description

THAP domain containing, apoptosis associated protein 3 [Source:HGNC Symbol;Acc:20855]

Location

Chromosome 1: 6,688,455-6,690,386 forward strand.

About this transcript

This transcript has 2 exons, is associated with 972 variant alleles and maps to 66 oligo probes.

Gene

This transcript is a product of gene ENSG00000041988.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000054650.4	THAP3-001	1366	239aa	ENSP00000054650.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55572	Q8WTV1	NM_001195753.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377627.3	THAP3-008	2053	175aa	ENSP00000366854.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS86	Q8WTV1	NM_138350.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000307896.6	THAP3-003	1046	238aa	ENSP00000311537.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55573	Q8WTV1	NM_001195752.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472925.1	THAP3-005	983	231aa	ENSP00000473646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000487819.1	THAP3-004	840	124aa	ENSP00000464954.1	Nonsense mediated decay		K7EIZ2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000484676.1	THAP3-006	879	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484669.2	THAP3-002	744	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480647.1	THAP3-007	336	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 336 bps,

Version

ENST00000480647.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000004209 (version 1)

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Transcript: ENST00000480647.1 THAP3-007

Summary