Description
nuclear receptor subfamily 1, group H, member 3 [Source:HGNC Symbol;Acc:7966]
Gene Synonyms
LXR-a, LXRA, RLD-1
Location
Chromosome 11: 47,279,514-47,281,503 forward strand.
About this transcript
This transcript has 3 exons, is annotated with 1 domain and feature, is associated with 863 variant alleles and maps to 180 oligo probes.
Gene
This transcript is a product of gene ENSG00000025434.14 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000467728.1 | NR1H3-001 | 2731 | 447aa | ENSP00000420656.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7929 | C9J2C8 C9J4R0 C9JBS2 C9JCS0 C9JEC2 C9JJ16 C9JTS4 F1D8N1 Q13133 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000481889.2 | NR1H3-023 | 1704 | 466aa | ENSP00000433271.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 E9PLL4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000441012.2 | NR1H3-030 | 1637 | 447aa | ENSP00000387946.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7929 | C9J2C8 C9J4R0 C9JBS2 C9JCS0 C9JEC2 C9JJ16 C9JTS4 F1D8N1 Q13133 | NM_005693.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000395397.3 | NR1H3-031 | 1501 | 402aa | ENSP00000378793.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44585 | C9J2C8 Q13133 | NM_001130102.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000405853.3 | NR1H3-006 | 1480 | 387aa | ENSP00000384745.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44584 | B5MBY7 C9J2C8 C9J4R0 C9JBS2 C9JCS0 C9JEC2 C9JJ16 C9JTS4 E9PID2 Q13133 | NM_001130101.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000405576.1 | NR1H3-003 | 1352 | 342aa | ENSP00000385073.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B5MBY7 C9J2C8 E9PID2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000407404.1 | NR1H3-002 | 1330 | 387aa | ENSP00000385801.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44584 | B5MBY7 C9J2C8 C9J4R0 C9JBS2 C9JCS0 C9JEC2 C9JJ16 C9JTS4 E9PID2 Q13133 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000527949.1 | NR1H3-032 | 1065 | 296aa | ENSP00000432073.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PID2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000436029.1 | NR1H3-016 | 911 | 212aa | ENSP00000403696.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 C9J4R0 C9JBS2 C9JCS0 C9JEC2 C9JJ16 C9JTS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000449369.1 | NR1H3-013 | 825 | 205aa | ENSP00000415591.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 C9J4R0 C9JCS0 C9JEC2 C9JJ16 C9JTS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000436778.1 | NR1H3-007 | 802 | 202aa | ENSP00000403798.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 C9J4R0 C9JEC2 C9JJ16 C9JTS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000444396.1 | NR1H3-010 | 784 | 193aa | ENSP00000391005.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 C9J4R0 C9JEC2 C9JTS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000531660.1 | NR1H3-037 | 667 | 167aa | ENSP00000434650.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PPA1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000412937.1 | NR1H3-012 | 574 | 134aa | ENSP00000412636.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000457932.1 | NR1H3-011 | 552 | 77aa | ENSP00000413095.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JEC2 C9JTS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000437276.1 | NR1H3-017 | 440 | 68aa | ENSP00000396132.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JEC2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000420369.1 | NR1H3-019 | 780 | 114aa | ENSP00000406692.1 | Nonsense mediated decay | F8WC63 | - | - | |
| ENST00000419652.1 | NR1H3-014 | 555 | 54aa | ENSP00000407716.1 | Nonsense mediated decay | F8WEY6 | - | - | |
| ENST00000529540.1 | NR1H3-029 | 1673 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000527464.1 | NR1H3-028 | 1183 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000461778.1 | NR1H3-015 | 726 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000525441.1 | NR1H3-039 | 610 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000476086.2 | NR1H3-038 | 588 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000495866.1 | NR1H3-026 | 569 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000532630.1 | NR1H3-036 | 549 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000473222.1 | NR1H3-022 | 549 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000530310.1 | NR1H3-035 | 542 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000481020.1 | NR1H3-005 | 1704 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000487913.1 | NR1H3-008 | 852 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000462051.1 | NR1H3-024 | 706 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000483882.1 | NR1H3-021 | 572 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000498548.1 | NR1H3-018 | 559 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000486991.1 | NR1H3-009 | 539 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494018.1 | NR1H3-025 | 510 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |