Transcript: ENST00000226279.3 CD38-001

Description

CD38 molecule [Source:HGNC Symbol;Acc:1667]

Gene Synonyms

T10

Location

About this transcript

This transcript has 8 exons, is annotated with 8 domains and features, is associated with 32286 variant alleles and maps to 483 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000226279.3	CD38-001	5668	300aa	ENSP00000226279.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3417	B4DMR7 P28907 Q4FCX6	NM_001775.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510674.1	CD38-005	455	151aa	ENSP00000423047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y950	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000502843.1	CD38-002	1560	122aa	ENSP00000427277.1	Nonsense mediated decay		P28907 Q4FCX6	-	-
ENST00000511430.1	CD38-003	1672	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000506191.1	CD38-004	594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 5,668 bps, Translation length: 300 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P28907

CCDS

This transcript is a member of the Human CCDS set: CCDS3417

Version

ENST00000226279.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250322 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.