Description
trafficking protein particle complex 2 [Source:HGNC Symbol;Acc:23068]
Gene Synonyms
MIP-2A, MIP2A, SEDL, SEDT, TRAPPC2P1, TRS20, ZNF547, ZNF547L, hYP38334
Location
Chromosome X: 13,730,363-13,752,754 reverse strand.
GRCh37:CM000685.1
About this gene
This gene has 10 transcripts (splice variants), 1 paralogue and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000458511.2 | TRAPPC2-005 | 678 | 174aa | ENSP00000392495.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS48083 | E5RFG0 P0DI81 Q6IBE5 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000453655.2 | TRAPPC2-203 | 2879 | 147aa | ENSP00000394629.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFG0 G1K394 | NM_001128835.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000380579.1 | TRAPPC2-002 | 2776 | 140aa | ENSP00000369953.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS48082 | E5RFG0 P0DI81 Q6IBE5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000359680.5 | TRAPPC2-202 | 2716 | 140aa | ENSP00000352708.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS48082 | E5RFG0 P0DI81 Q6IBE5 | NM_014563.5 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000358231.5 | TRAPPC2-201 | 1980 | 140aa | ENSP00000350966.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS48082 | E5RFG0 P0DI81 Q6IBE5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000518847.1 | TRAPPC2-008 | 562 | 74aa | ENSP00000428900.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFG0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000519885.1 | TRAPPC2-006 | 561 | 113aa | ENSP00000430725.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFG0 F5H785 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000380578.1 | TRAPPC2-001 | 3108 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000519382.1 | TRAPPC2-004 | 1411 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000517553.1 | TRAPPC2-007 | 475 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
